User Guide for the DEEP system

News, current problems and solutions

• News about the system
• Known issues and solutions (workarounds)

Tutorial for new users

This tutorial will help you with your first steps on our project prototype:

• First steps tutorial
• Performance analysing and tuning tutorial

System overview

• System Overview
• Filesystems

Access the system

• Get an account
• Switch/change your project
• Information about the batchsystem

How to use certain partitions and nodes

• DEEP-EST Cluster Module (dp-cn)
• DEEP-EST Data Analytics Module (dp-dam)
• DEEP-EST Extreme Scale Booster (dp-esb)
• Heterogeneous and modular jobs
• SAGE

Information on software and tools

• Available software and Modules environment
• Easybuild userspace installations
• Programming with OmpSs-2
• Usage of TAMPI
• Offloading Hybrid Applications' Tasks to GPUs (MPI + OpenMP/OmpSs-2)
• Accessing Network Attached Memory (NAM) from Tasks using TAMPI
• Parallel I/O with SIONlib
• Resiliency:
  • Usage of SCR (Scalable Checkpoint Restart)
  • Using FTI (Fault Tolerance Interface)
  • Usage of OpenCHK
• Intel Advisor XE (Vectorisation analysis)
• Integrate applications in JUBE
• Using the Benchmark Suite
• ParaStation MPI
• Energy Measurement

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Reporting Problems

• For general application problems or running jobs please write an email to the support list: sc@…
• Problems at DEEP with system management in general or other unspecified issues should be reported by creating a ticket. To do so please send a mail to deeptrac(at)support.par-tec.com
• Chat: ​https://chat.fz-juelich.de/group/jsc_deep